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Convex Relaxations for Permutation Problems

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Claims that spectral ordering via the Fiedler vector spectral ordering recovers seriation exactly for noiseless R-matrices, and that seriation equals a two-sum quadratic objective that is NP-hard in general. Method builds a convex relaxation over doubly stochastic relaxation matrices, adds a small concave penalty and linear side constraints to encode pairwise order information, then samples monotone projections to recover permutations. Results: spectral step handles large data (example: 250,000 reads in 2 seconds), QP finishes on blocks of size ~100–200 and improves accuracy when structural constraints are added; spectral fails once noise exceeds the spectral gap.

AI-written summary · about

  1. 0:00Intro
  2. 0:35CI Asian
  3. 3:10Why is this important
  4. 5:08spectral solution
  5. 5:30spectral clustering
  6. 7:50additional structural information
  7. 11:43cut matrices
  8. 16:05why do we care
  9. 17:25the convex hull
  10. 18:35the objective
  11. 22:38the hack
  12. 25:38linear constraints
  13. 28:23metrics
  14. 30:13historical examples
  15. 32:03numerical results
  16. 33:18Markov chains
  17. 35:15Numerical information
  18. 37:03DNA
  19. 41:17Conclusion
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